Information for 9-GGCTCTWAGAAATRAG (Motif 11)

A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
Reverse Opposite:
A G T C A G C T G A T C C G T A A C G T G A C T C G A T G A T C C G A T G C T A C G T A C T A G G T C A C T A G A G T C A G T C
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.706
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.2 +/- 13.6bp
Average Position of motif in Background59.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTCTWAGAAATRAG
-TTTCTNAGAAAN---
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGCTCTWAGAAATRAG
--TTCTTGGAAAN---
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCTWAGAAATRAG
NGGATTAN---------
 A C G T A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGCTCTWAGAAATRAG--------
--TTTTTAGAGATAAGAAATAAAG
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGCTCTWAGAAATRAG
NGCTN-----------
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GGCTCTWAGAAATRAG
---CCTTTGATGT---
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGCTCTWAGAAATRAG
GGCTCYAKCAYC----
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTWAGAAATRAG
AAAGCTCGTAAAATTT--
 A C G T A C G T A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:GGCTCTWAGAAATRAG--
-------ANAGATAAGAA
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:GGCTCTWAGAAATRAG
-GCTCGTAAAAA----
 A C T G C T A G G A T C A C G T A G T C G A C T C G A T C G T A C T A G C G T A C G T A T G C A A C G T C T A G C T G A C T A G
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T