Information for 1-ACTTCTGACTCCG (Motif 1)

C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
Reverse Opposite:
G T A C A C T G A C T G C T G A A T C G A C G T A G T C G T C A C T A G C T G A G T C A A T C G A C G T
p-value:1e-16
log p-value:-3.739e+01
Information Content per bp:1.803
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.1 +/- 24.8bp
Average Position of motif in Background39.6 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTTCTGACTCCG----
TGTCGTGACCCCTTAAT
 C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

RXRB/MA0855.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCTGACTCCG
TGACCTTTGACCCC-
 A C G T A C G T C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCTGACTCCG
TGACCTCTGACCCCN
 A C G T A C G T C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTTCTGACTCCG----
NNNNTTGACCCCTNNNN
 C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCTGACTCCG
TGACCTTTGACCCC-
 A C G T A C G T C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCTGACTCCG
TGACCTTTGACCCC-
 A C G T A C G T C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTTCTGACTCCG----
NNANTTGACCCCTNNNN
 C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCTGACTCCG
TGACCTTTGACCTC-
 A C G T A C G T C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ACTTCTGACTCCG
-----TGACCYCT
 C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCTGACTCCG
TGACCTTTGACCTN-
 A C G T A C G T C G T A A T G C A C G T A G C T A G T C A C G T A C T G G T C A A T G C A G C T G T A C A G T C A C T G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T