Information for 14-CCCATAAAAT (Motif 9)

G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G A T C G T A C G A T A C T G C A T G C T A G
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif103.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets53.1 +/- 28.6bp
Average Position of motif in Background47.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCCATAAAAT
CCYMATAAAA-
 A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CCCATAAAAT
CCAATAAAAC
 G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CCCATAAAAT
CCAATAAAAA
 G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCCATAAAAT
NCYAATAAAA-
 A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---CCCATAAAAT---
CTACCAATAAAATTCT
 A C G T A C G T A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---CCCATAAAAT---
AACCCAATAAAATTCG
 A C G T A C G T A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CCCATAAAAT
CCAATAAAAA
 G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCCATAAAAT
NGCAATTAAA-
 A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCCATAAAAT---
AGAGCCATAAAATTCG
 A C G T A C G T A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---CCCATAAAAT----
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T G A T C G A T C G T A C C G T A A C G T C G T A C G T A C G T A C G T A G C A T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T