Information for 3-YBCCCCCMAMCWCCGC (Motif 4)

A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
Reverse Opposite:
A C T G G T A C T A C G A T C G C G T A C T A G C A T G C G A T A C T G A C T G A C T G T A C G A C T G T A C G T C G A T C G A
p-value:1e-13
log p-value:-3.067e+01
Information Content per bp:1.678
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif231.2
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets47.0 +/- 29.3bp
Average Position of motif in Background49.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0100.1_Zfp740_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---YBCCCCCMAMCWCCGC
CCCCCCCCCCCACTTG---
 A C G T A C G T A C G T A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YBCCCCCMAMCWCCGC------
--CCCCAAACCACCCCCCCCCA
 A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YBCCCCCMAMCWCCGC
CCCCCCCCAC------
 A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:YBCCCCCMAMCWCCGC-
---CCCCCGCCCCCGCC
 A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C A C G T
A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:YBCCCCCMAMCWCCGC
----CCCCTCCCCCAC
 A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----YBCCCCCMAMCWCCGC
TCCCCCCCCCCCCCC-----
 A C G T A C G T A C G T A C G T A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----YBCCCCCMAMCWCCGC
TACGCCCCGCCACTCTG---
 A C G T A C G T A C G T A C G T A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YBCCCCCMAMCWCCGC
GCTCCGCCCMCY-----
 A C G T A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YBCCCCCMAMCWCCGC
GCCMCGCCCMCY-----
 A C G T A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YBCCCCCMAMCWCCGC
TTTCCCGCCMAV------
 A C G T A C G T A G C T A G C T A T G C G T A C A T G C A G T C G T A C T G A C C G T A G T A C A G T C G C A T A T G C A G T C C A T G A G T C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T