Information for 5-GCCYGYCMCYCAYCCR (Motif 17)

A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
Reverse Opposite:
A G C T A C T G A T C G C T A G A C G T A C T G C T G A A C T G A C G T A C T G C T G A A G T C C T G A A C T G A C T G A G T C
p-value:1e-5
log p-value:-1.366e+01
Information Content per bp:1.849
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 31.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCCYGYCMCYCAYCCR
GSCTGTCACTCA----
 A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCYGYCMCYCAYCCR
-NCTGTCAATCAN---
 A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCYGYCMCYCAYCCR
-SCTGTCAVTCAV---
 A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCYGYCMCYCAYCCR
-CCCCTCCCCCAC---
 A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCYGYCMCYCAYCCR--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCYGYCMCYCAYCCR
TCCCCCCCCCCCCCC--
 A C G T A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCYGYCMCYCAYCCR
GCCCCGCCCCCTCCC--
 A C G T A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCCYGYCMCYCAYCCR
------CRCCCACGCA
 A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCYGYCMCYCAYCCR
ATCCCCGCCCCTAAAA--
 A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCYGYCMCYCAYCCR
TGTCTGDCACCT-----
 A C G T A C T G A G T C A G T C A G C T A C T G A G C T A G T C G T C A A G T C A G C T A G T C C G T A G A C T A T G C A G T C C T G A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T