Information for 1-TYYGATTGGYYVNNGB (Motif 1)

A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
Reverse Opposite:
T A C G T G A C T C G A A G C T A G T C T C A G C T A G G A T C A G T C G C T A T G C A G C A T T A G C T C G A T C A G T C G A
p-value:1e-108
log p-value:-2.504e+02
Information Content per bp:1.529
Number of Target Sequences with motif209.0
Percentage of Target Sequences with motif23.59%
Number of Background Sequences with motif1555.1
Percentage of Background Sequences with motif3.38%
Average Position of motif in Targets50.6 +/- 25.8bp
Average Position of motif in Background49.1 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:TYYGATTGGYYVNNGB
-CCGATTGGCT-----
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:TYYGATTGGYYVNNGB
-CTGATTGGTCNATTT
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:TYYGATTGGYYVNNGB
--TGATTGGCTANN--
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----TYYGATTGGYYVNNGB
AGAGTGCTGATTGGTCCA---
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TYYGATTGGYYVNNGB
-TTGATTGN-------
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.75
Offset:5
Orientation:forward strand
Alignment:TYYGATTGGYYVNNGB
-----TTGGCA-----
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TYYGATTGGYYVNNGB
-NTAATTGG-------
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TYYGATTGGYYVNNGB
NNNNGTTGATTGGGTCG---
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TYYGATTGGYYVNNGB
-NTAATTGG-------
 A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TYYGATTGGYYVNNGB
NTTTTATTGG-------
 A C G T A G C T A G T C A G C T A T C G C G T A A C G T C G A T A C T G C T A G G A T C A G T C T C A G C T G A A G C T A C T G A T G C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T