Information for 4-AACAGGCACA (Motif 5)

T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T C T A G A G T C A G T C C G A T T A C G A C G T A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.677
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif11.81%
Number of Background Sequences with motif622.1
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets50.8 +/- 27.5bp
Average Position of motif in Background50.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AACAGGCACA--
AGCAACAGCCGCACC
 A C G T A C G T A C G T T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AACAGGCACA-------
-CGAAGCACACAAAATA
 T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACAGGCACA-
-CCAGGAACAG
 T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACAGGCACA-------
-AGCGGCACACACGCAA
 T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACAGGCACA
CCAACTGCCA--
 A C G T A C G T T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACAGGCACA
NHAACBGYYV--
 A C G T A C G T T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AACAGGCACA
CCAACTGCCA--
 A C G T A C G T T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AACAGGCACA
AACCGANA--
 T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AACAGGCACA
YAACBGCC---
 A C G T T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AACAGGCACA-
---AGGCCTAG
 T G C A C G T A A G T C G C T A C T A G C T A G G A T C T G C A A G T C C G T A A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G