Information for 3-AAAACACTGAGTAWAA (Motif 8)

G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
Reverse Opposite:
A C G T A G C T C G A T C G A T G C T A G A T C G A C T A G T C C G T A C T A G C G A T A C T G A C G T A C G T C G A T A C G T
p-value:1e-12
log p-value:-2.916e+01
Information Content per bp:1.669
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif66.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets46.1 +/- 21.5bp
Average Position of motif in Background53.3 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAACACTGAGTAWAA
CAAATCACTG-------
 A C G T G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAACACTGAGTAWAA
AAATCACAGCA-----
 G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAACACTGAGTAWAA
AAACCACANN------
 G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAACACTGAGTAWAA
AAACCACAGAN-----
 G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAACACTGAGTAWAA
AAATCACTGC------
 G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAACACTGAGTAWAA
NAAACCACAG-------
 A C G T G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAAACACTGAGTAWAA
AACACCAAAACAAAGGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAAACACTGAGTAWAA
AAACCACAGC------
 G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAAACACTGAGTAWAA
-AAGCACTTAA-----
 G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAAACACTGAGTAWAA
GCAAAACATTACTA----
 A C G T A C G T G T C A C G T A G T C A T G C A G T A C C G T A A G T C C G A T C T A G C T G A C T A G C G A T C G T A C G T A C T G A T G C A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T A C G T A C G T