Information for 16-CCTRGSCTARGAR (Motif 25)

A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C G T C G T A A C T G A T G C A G T C G A C T C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.651e+01
Information Content per bp:1.875
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 25.7bp
Average Position of motif in Background51.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTRGSCTARGAR
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTRGSCTARGAR
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTRGSCTARGAR
--TWGTCTGV---
 A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCTRGSCTARGAR
NNACTTGCCTT----
 A C G T A C G T A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CCTRGSCTARGAR
--AGGCCTAG---
 A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCTRGSCTARGAR
-CTGACCTTTG--
 A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CCTRGSCTARGAR
CNAGGCCT-----
 A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--CCTRGSCTARGAR-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CCTRGSCTARGAR
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--CCTRGSCTARGAR-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T C T G A A C T G A T C G A G T C A C G T C G T A C T A G A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A