Information for 4-AGGCAAGTGC (Motif 10)

C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C G C T A A G T C A C G T A C G T A T C G G A T C A G T C A G C T
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.837
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif139.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets44.8 +/- 20.0bp
Average Position of motif in Background50.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAGTGC
AAGGCAAGTGT
 A C G T C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AGGCAAGTGC
TAACGACACGTGC
 A C G T A C G T A C G T C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGGCAAGTGC-
-GACACGTGCC
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGCAAGTGC--
TGGCACGTGCCA
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C A C G T A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGCAAGTGC--
CGGCACGTGCCA
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C A C G T A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGGCAAGTGC
NGKCACGTGM
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGCAAGTGC-
-GGCACGTGTC
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C A C G T
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGGCAAGTGC-
-NTCAAGTGGN
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGCAAGTGC-
-GTCACGTGAN
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C A C G T
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGCAAGTGC
-NTCAAGTGG
 C T G A C T A G C T A G T A G C C G T A T G C A C T A G C G A T A C T G A G T C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G