Information for 5-ACCCTTGGTA (Motif 7)

T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
Reverse Opposite:
A G C T T C G A A G T C G T A C C G T A C G T A C T A G A C T G A C T G A G C T
p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.855
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif98.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets52.4 +/- 26.1bp
Average Position of motif in Background50.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACCCTTGGTA--
--NNTTGGCANN
 T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACCCTTGGTA
-CCTTTGTT-
 T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTTGGTA--
ANTCCCTNGGGAAT
 A C G T A C G T T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACCCTTGGTA
NGTCCCNNGGGA
 A C G T A C G T T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACCCTTGGTA
-CCWTTGTY-
 T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACCCTTGGTA
BNTGDCCTTG---
 A C G T A C G T A C G T T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACCCTTGGTA
----TTGGCA
 T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACCCTTGGTA
TGACCTTGAN-
 A C G T T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACCCTTGGTA--
GCACCCCTGGGTGCC
 A C G T A C G T A C G T T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACCCTTGGTA-
---CTTGGCAA
 T C G A A G T C G T A C A G T C A C G T A C G T A C T G C T A G A G C T C T G A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A