Information for 2-AACATTCTTAGGCAAA (Motif 6)

G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C T G A G T C A G T C A C G T C T G A C G T A C T A G G T C A C G T A C G A T C A T G A C G T C A G T
p-value:1e-11
log p-value:-2.713e+01
Information Content per bp:1.804
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.8 +/- 20.9bp
Average Position of motif in Background66.6 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AACATTCTTAGGCAAA-
--CATTGTTATGCAAAT
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AACATTCTTAGGCAAA-
--CTTTGTTATGCAAAT
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:8
Orientation:forward strand
Alignment:AACATTCTTAGGCAAA---
--------AAGGCAAGTGT
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:AACATTCTTAGGCAAA-
-------ATATGCAAAT
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AACATTCTTAGGCAAA-
-------TTATGCAAAT
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACATTCTTAGGCAAA
-ACATGCCCGGGCAT-
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AACATTCTTAGGCAAA
----TTCTNMGGAA--
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A
A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AACATTCTTAGGCAAA----
-------ATATGCAAATNNN
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AACATTCTTAGGCAAA-
--ANTTCTCAGGAANNN
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T
A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AACATTCTTAGGCAAA-----
-----TTGTATGCAAATTAGA
 G C T A C G T A G T A C C G T A A C G T A C G T A G T C G A C T A G C T C G T A A C T G A C T G A G T C C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A