Information for 3-GTKCAAAGTC (Motif 3)

A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C
Reverse Opposite:
C T A G T G C A A G T C G A C T A C G T A G C T T C A G G T A C G T C A T A G C
p-value:1e-14
log p-value:-3.288e+01
Information Content per bp:1.633
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif12.88%
Number of Background Sequences with motif2716.3
Percentage of Background Sequences with motif5.57%
Average Position of motif in Targets55.6 +/- 24.3bp
Average Position of motif in Background50.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GTKCAAAGTC--
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTKCAAAGTC
ACATCAAAGG-
 A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTKCAAAGTC--
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTKCAAAGTC-
AAAGATCAAAGGAA
 A C G T A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTKCAAAGTC
ACWTCAAAGG-
 A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTKCAAAGTC-
ACATCAAAGGNA
 A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTKCAAAGTC----
GGGGTCAAAGTCCAAT
 A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTKCAAAGTC---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTKCAAAGTC---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTKCAAAGTC---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A T C G C A G T C A T G A G T C T C G A G T C A C T G A A C T G A C G T G A T C A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T