Information for 13-TTGAAGATACCAT (Motif 16)

A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G A C T G A G C T C G T A A C G T A G T C A C G T A C G T A G T C C G T A C T G A
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 31.8bp
Average Position of motif in Background21.2 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TTGAAGATACCAT
----AGATAASR-
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGAAGATACCAT---
GACAGAGATATCAGTGT
 A C G T A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGAAGATACCAT--------
-NDBAGATRWTATCTVNNNNN
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

PB0125.1_Gata3_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGAAGATACCAT-------
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAGATACCAT---
AATNTTGATACCCTATN
 A C G T A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGAAGATACCAT
-NGAAGC------
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTGAAGATACCAT
----AGATAAGA-
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTGAAGATACCAT
ATGMATATDC---
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGAAGATACCAT---
-AGATGCTRCTRCCHT
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTGAAGATACCAT
AAGATGATGTCAT
 A G C T A C G T A C T G C G T A C G T A A C T G C G T A A C G T C T G A T A G C A G T C C G T A A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T