Information for 2-TACATTAAYATYT (Motif 4)

G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
Reverse Opposite:
C G T A T C G A T C G A C G A T C T G A C G A T A C G T G T C A C G T A C A G T A C T G G C A T C G T A
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.594
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif11.59%
Number of Background Sequences with motif1814.4
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets50.2 +/- 23.1bp
Average Position of motif in Background49.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TACATTAAYATYT--
AATGCAATAAAATTTAT
 A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TACATTAAYATYT
NNCATTCATTCATNNN-
 A C G T A C G T A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TACATTAAYATYT
GACNTCATTAATAANN
 A C G T A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TACATTAAYATYT-
CTACCAATAAAATTCT
 A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TACATTAAYATYT
NTAATTAATAT--
 G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TACATTAAYATYT--
AACAATAACATTGTT
 G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TACATTAAYATYT-
GACCACATTCATACAAT
 A C G T A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TACATTAAYATYT
---ATTAACACCT
 G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TACATTAAYATYT
NNNTAACAATTATAN--
 A C G T A C G T A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TACATTAAYATYT
CAAACAACAACACCT
 A C G T A C G T G C A T C G T A A G T C G T C A G C A T C A G T T G C A G C T A G A C T C G T A A G C T A G C T G C A T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T