Information for 1-AGTGATTHACTGG (Motif 2)

C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A T C G A C G T C A G T C T G A G T C A A C G T G T A C C G T A A T G C A C G T
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.834
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.4 +/- 24.1bp
Average Position of motif in Background51.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGTGATTHACTGG-
--TGAGTGACAGSC
 C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTGATTHACTGG
-NTGATTGACAGN
 C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGATTHACTGG-
-NTGATTTATGGCC
 C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGATTHACTGG
-BTGABTGACAGS
 C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTGATTHACTGG
TTAATNATTAAC---
 A C G T A C G T C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGTGATTHACTGG
AGTTAATGATTAACT--
 A C G T A C G T A C G T A C G T C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATTHACTGG
GTTAATNATTAAC---
 A C G T A C G T A C G T C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTGATTHACTGG
NNATGASTCATH--
 A C G T C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTGATTHACTGG
--TGAGTCA----
 C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTGATTHACTGG-
--TGATTTATGGCC
 C G T A A T C G C G A T A C T G C G T A A C G T A G C T G C T A C G T A A T G C C G A T A C T G A T C G A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C