Information for 5-CTRTRATARCAGCTTG (Motif 7)

A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A A C T G A G T C C G A T A C T G A G T C G A C T G T C A C G A T A G C T G C T A A G T C C G T A T A C G
p-value:1e-11
log p-value:-2.701e+01
Information Content per bp:1.755
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.4 +/- 26.7bp
Average Position of motif in Background57.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTRTRATARCAGCTTG--
-GATATTGACAGCTGCGT
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G A C G T A C G T
A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTRTRATARCAGCTTG
------NAACAGCTGG
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTRTRATARCAGCTTG--
--NTATTGACAGCTNNTT
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G A C G T A C G T
A C G T A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTRTRATARCAGCTTG
-----TTMACACCTT-
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTRTRATARCAGCTTG--
--GTATTGACAGCTNNTT
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTRTRATARCAGCTTG
-------ANCAGCTG-
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTRTRATARCAGCTTG-
-------AACAKATGGY
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CTRTRATARCAGCTTG
---------AAGCTTG
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTRTRATARCAGCTTG-
-------AACAGATGGC
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTRTRATARCAGCTTG---
----GAGCACAGCAGGACA
 A G T C A C G T C T A G C G A T C T G A C G T A A C G T C T G A C T A G G T A C C G T A A C T G G T A C A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A