Information for 3-GCTGAGATAGATTTCT (Motif 5)

A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T
Reverse Opposite:
C G T A C A T G C T G A C G T A C G T A A C G T G A T C A C G T C G T A C G A T A G T C A C G T A G T C C G T A A T C G A T G C
p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 20.7bp
Average Position of motif in Background83.1 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTGAGATAGATTTCT--
---NAGATWNBNATCTNN
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT
------ATTGATTYND
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT-
---ANTATCGATTTTTN
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T A C G T
A C G T A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTGAGATAGATTTCT----
---GACAGAGATATCAGTGT
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT-
---ATTATCGATTTTTT
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T A C G T
A C G T A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT
GCAGTGATTT------
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT
---ATGATKGATGRC-
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGATAGATTTCT
TGCTGTGATTT------
 A C G T A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT
-TTGACCTANTTATN-
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCTGAGATAGATTTCT-
---NTTATTGATTTTTT
 A T C G A T G C A C G T A C T G C G T A A C T G C G T A A C G T G T C A C T A G C G T A A C G T C G A T A G C T G A T C C G A T A C G T
A C G T A C G T A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T