p-value: | 1e-6 |
log p-value: | -1.452e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.42% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.3 +/- 13.3bp |
Average Position of motif in Background | 26.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0056.1_Hoxa9/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGGCCATGATAT---- ACGGCCATAAAATTAAT |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGGCCATGATAT TRAGGTCA------ |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGGCCATGATAT -AGGCCTNG---- |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGGCCATGATAT--- AGAGCCATAAAATTCG |
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YY1/MA0095.2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAGGCCATGATAT GCNGCCATCTTG- |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGGCCATGATAT -AGGCCTAG---- |
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PH0012.1_Cdx1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGGCCATGATAT-- TAAGGTAATAAAATTA |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGGCCATGATAT-- AAAGGTAATAAAATTT |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGGCCATGATAT AGRGGTCA------ |
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ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGGCCATGATAT ARGAGGMCAAAATGW |
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