Information for 13-CMCCACAGSGTAA (Motif 33)

A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
Reverse Opposite:
A C G T A C G T C T G A A T G C A T G C A G T C A C G T C T A G A C G T A C T G A C T G A C G T C T A G
p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.2 +/- 22.8bp
Average Position of motif in Background47.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CMCCACAGSGTAA
AAACCACAGC----
 A C G T A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CMCCACAGSGTAA
---CACAGN----
 A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CMCCACAGSGTAA
NWAACCACADNN---
 A C G T A C G T A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CMCCACAGSGTAA
AAACCACAGAN---
 A C G T A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CMCCACAGSGTAA
NAAACCACAG-----
 A C G T A C G T A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CMCCACAGSGTAA--
-----CAAGGHCANV
 A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CMCCACAGSGTAA
AAACCACANN----
 A C G T A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CMCCACAGSGTAA
-GCCTCAGGGCAT
 A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CMCCACAGSGTAA
---BTCAAGGTCA
 A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CMCCACAGSGTAA--
----TCAAGGTCATA
 A G T C G T C A G T A C G T A C G T C A A G T C C G T A C T A G A T C G A T C G A G C T T G C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A