Information for 2-GTAATGTCCC (Motif 12)

A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G C T A G C G T A A G T C C G T A A C G T A C G T G T C A A T G C
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif46.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.8 +/- 28.4bp
Average Position of motif in Background49.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTAATGTCCC
GGGAATTTCC-
 A C G T A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAATGTCCC-
GGGAAATCCCCN
 A C G T A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTAATGTCCC
GGAAANCCCC
 A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAATGTCCC
GGAAATTCCC
 A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTAATGTCCC
TGGAATGT---
 A C G T A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAATGTCCC
GGAAATCCCC
 A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTAATGTCCC
NTGGAATGTN--
 A C G T A C G T A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTAATGTCCC---
---CTGTTCCTGG
 A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTAATGTCCC
CCWGGAATGY---
 A C G T A C G T A C G T A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTAATGTCCC
NTGGAATGTG--
 A C G T A C G T A T C G C A G T C G T A G T C A A C G T T C A G A C G T A G T C A G T C A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T