Information for 7-ACAATACACA (Motif 20)

C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
Reverse Opposite:
C G A T C T A G A G C T A C T G C G A T G C T A A G C T A C G T A C T G A G C T
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.728
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif733.7
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets52.4 +/- 26.1bp
Average Position of motif in Background49.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACAATACACA
TCCAATCCACA
 A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACAATACACA
AACAAT-----
 A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------ACAATACACA
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------ACAATACACA-
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATACACA
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ACAATACACA-
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ACAATACACA
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ACAATACACA
GTAAACAAT-----
 A C G T A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAATACACA--
SSAATCCACANN
 C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACAATACACA
RNAACAATGG---
 A C G T A C G T A C G T C T G A G T A C C G T A C T G A C G A T C G T A G T A C T C G A G A T C G C T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T