Information for 3-TGTCTATTATTATCAT (Motif 18)

A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
Reverse Opposite:
C T G A G A C T C T A G C G T A C G A T C G T A C T G A C G A T C G T A C G T A A C G T C G T A A T C G C G T A A G T C C G T A
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.880
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.6 +/- 17.7bp
Average Position of motif in Background58.2 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0069.1_Sox21_1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT-
-NNTAATTATAATNANN
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T A C G T
A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTCTATTATTATCAT
--GCTATTTTTAGC--
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT
--TCTATTTTTAGA--
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT
-TTCTATTTTTAGNNN
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT-
-NCGTATTATAATCNTA
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T A C G T
A C G T A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTCTATTATTATCAT-
-GCTAATTATAATTATC
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T A C G T
A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT-
-NANTATTATAATTNNN
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T A C G T
A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT
--KCTATTTTTRGH--
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT
--TCTATTTATAGN--
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCTATTATTATCAT
--GCTATTTATAGC--
 A C G T A C T G A C G T A T G C A C G T C G T A C G A T A C G T C G T A A G C T C G A T C G T A A C G T A G T C C T G A A G C T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T