Information for 1-AAAGAMTKWGKCA (Motif 1)

G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A T G C C G A T G T A C C G T A A C G T A C G T G T A C A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.044e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AAAGAMTKWGKCA-
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAGAMTKWGKCA-
AGGAGATGACTCAT
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AAAGAMTKWGKCA
------TGAGTCA
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAAGAMTKWGKCA--
---NNVTGASTCATN
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGAMTKWGKCA
--GAAATGACTCA
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A
A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAAGAMTKWGKCA--
---NNATGASTCATH
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAAGAMTKWGKCA-
----GATGAGTCAT
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAGAMTKWGKCA---
-----ATGAGTCATCN
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAGAMTKWGKCA--
-----ATGASTCATY
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAAGAMTKWGKCA--
---NNATGAGTCATN
 G T C A C G T A C G T A A C T G C G T A G T C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C