Information for 2-TGSTGCCAYCWGGTGK (Motif 3)

A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G
Reverse Opposite:
T G A C T A G C C T G A A T G C G A T C C G T A C A T G C T A G A C G T A C T G C A T G A G T C C T G A T A C G G A T C T G C A
p-value:1e-23
log p-value:-5.419e+01
Information Content per bp:1.627
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif29.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.6 +/- 22.3bp
Average Position of motif in Background43.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TGSTGCCAYCWGGTGK---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGSTGCCAYCWGGTGK---
TAGCGCCCCCTGGTGGCCA
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TGSTGCCAYCWGGTGK-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TGSTGCCAYCWGGTGK-
-------AACAGGTGNT
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGSTGCCAYCWGGTGK
----GCCATCTGTT--
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TGSTGCCAYCWGGTGK-
-------NNCAGGTGNN
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGSTGCCAYCWGGTGK
------CAGCAGCTGN
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGSTGCCAYCWGGTGK-
-------NNCAGGTGTN
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGSTGCCAYCWGGTGK
-------ACCACGTG-
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGSTGCCAYCWGGTGK
----GCCAGCTGBTNB
 A C G T C T A G A T G C A G C T C T A G G T A C T G A C G T C A G A T C G A T C G C A T C T A G A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C