Information for 14-GCAAGATGCC (Motif 23)

A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C G T A C T G A G T C
p-value:1e-2
log p-value:-5.758e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.8 +/- 12.4bp
Average Position of motif in Background38.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCAAGATGCC---
-CAAGATGGCGGC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCAAGATGCC---
-CAAGATGGCGGC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAAGATGCC---
-CAAGACGCCTTA
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAAGATGCC--
TGGCACCATGCCAA
 A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCAAGATGCC----
-----ATGCCCACC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAAGATGCC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCAAGATGCC-
CTGGCAGNCTGCCA
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGATGCC---
TTGGCANNNTGCCAAG
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCAAGATGCC----
-----ATGCCAACC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAAGATGCC
VNAVCAGCTGGC
 A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A G T C A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C