Information for 12-ATGCACCTGCTGT (Motif 21)

C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A T C G A G T C C G T A A C T G A C T G A C G T C T A G A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.6 +/- 11.8bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATGCACCTGCTGT
SNGCACCTGCHS-
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ATGCACCTGCTGT-
--CCCCCTGCTGTG
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATGCACCTGCTGT
-CGCACCTGCT--
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATGCACCTGCTGT-
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATGCACCTGCTGT
-TACACCTGTC--
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATGCACCTGCTGT
--NCACCTGTN--
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATGCACCTGCTGT
-AACACCTGCT--
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATGCACCTGCTGT
-NNCACCTGNN--
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATGCACCTGCTGT----
--TNTCCTGCTGTGNNG
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATGCACCTGCTGT
RYHYACCTGB---
 C G T A A C G T A C T G A G T C G T C A A G T C A G T C A C G T A C T G A T G C A C G T A C T G A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T