Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-336 | -7.758e+02 | 0.0000 | 239.0 | 28.97% | 240.4 | 0.50% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-273 | -6.309e+02 | 0.0000 | 243.0 | 29.45% | 474.9 | 0.99% | motif file (matrix) |
svg |
3 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-17 | -4.130e+01 | 0.0000 | 60.0 | 7.27% | 887.8 | 1.85% | motif file (matrix) |
svg |
4 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-17 | -4.058e+01 | 0.0000 | 60.0 | 7.27% | 901.9 | 1.88% | motif file (matrix) |
svg |
5 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-17 | -3.980e+01 | 0.0000 | 72.0 | 8.73% | 1274.1 | 2.66% | motif file (matrix) |
svg |
6 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-16 | -3.893e+01 | 0.0000 | 66.0 | 8.00% | 1111.6 | 2.32% | motif file (matrix) |
svg |
7 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-16 | -3.748e+01 | 0.0000 | 63.0 | 7.64% | 1054.7 | 2.20% | motif file (matrix) |
svg |
8 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-15 | -3.491e+01 | 0.0000 | 42.0 | 5.09% | 523.5 | 1.09% | motif file (matrix) |
svg |
9 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.488e+01 | 0.0000 | 35.0 | 4.24% | 359.6 | 0.75% | motif file (matrix) |
svg |
10 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-15 | -3.455e+01 | 0.0000 | 51.0 | 6.18% | 768.7 | 1.60% | motif file (matrix) |
svg |
11 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-11 | -2.675e+01 | 0.0000 | 219.0 | 26.55% | 8101.1 | 16.90% | motif file (matrix) |
svg |
12 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-10 | -2.310e+01 | 0.0000 | 136.0 | 16.48% | 4488.6 | 9.37% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.826e+01 | 0.0000 | 27.0 | 3.27% | 421.1 | 0.88% | motif file (matrix) |
svg |
14 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-6 | -1.411e+01 | 0.0000 | 213.0 | 25.82% | 9075.8 | 18.94% | motif file (matrix) |
svg |
15 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.347e+01 | 0.0000 | 103.0 | 12.48% | 3707.5 | 7.74% | motif file (matrix) |
svg |
16 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-5 | -1.309e+01 | 0.0000 | 86.0 | 10.42% | 2958.4 | 6.17% | motif file (matrix) |
svg |
17 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-5 | -1.249e+01 | 0.0001 | 47.0 | 5.70% | 1319.5 | 2.75% | motif file (matrix) |
svg |
18 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-5 | -1.244e+01 | 0.0001 | 19.0 | 2.30% | 315.7 | 0.66% | motif file (matrix) |
svg |
19 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.244e+01 | 0.0001 | 7.0 | 0.85% | 36.1 | 0.08% | motif file (matrix) |
svg |
20 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-5 | -1.231e+01 | 0.0001 | 44.0 | 5.33% | 1208.6 | 2.52% | motif file (matrix) |
svg |
21 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.183e+01 | 0.0001 | 65.0 | 7.88% | 2115.3 | 4.41% | motif file (matrix) |
svg |
22 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-4 | -1.136e+01 | 0.0002 | 51.0 | 6.18% | 1545.9 | 3.23% | motif file (matrix) |
svg |
23 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.061e+01 | 0.0004 | 131.0 | 15.88% | 5340.1 | 11.14% | motif file (matrix) |
svg |
24 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-4 | -1.053e+01 | 0.0004 | 46.0 | 5.58% | 1385.5 | 2.89% | motif file (matrix) |
svg |
25 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-4 | -1.028e+01 | 0.0005 | 48.0 | 5.82% | 1484.1 | 3.10% | motif file (matrix) |
svg |
26 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.013e+01 | 0.0006 | 74.0 | 8.97% | 2648.2 | 5.53% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -1.011e+01 | 0.0006 | 56.0 | 6.79% | 1840.6 | 3.84% | motif file (matrix) |
svg |
28 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-4 | -9.924e+00 | 0.0006 | 22.0 | 2.67% | 481.2 | 1.00% | motif file (matrix) |
svg |
29 |
| YY1(Zf)/Promoter/Homer | 1e-4 | -9.825e+00 | 0.0007 | 12.0 | 1.45% | 170.7 | 0.36% | motif file (matrix) |
svg |
30 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-4 | -9.691e+00 | 0.0008 | 49.0 | 5.94% | 1564.7 | 3.26% | motif file (matrix) |
svg |
31 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.399e+00 | 0.0010 | 70.0 | 8.48% | 2526.1 | 5.27% | motif file (matrix) |
svg |
32 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -9.333e+00 | 0.0010 | 35.0 | 4.24% | 999.3 | 2.09% | motif file (matrix) |
svg |
33 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -8.805e+00 | 0.0017 | 52.0 | 6.30% | 1757.4 | 3.67% | motif file (matrix) |
svg |
34 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.177e+00 | 0.0030 | 32.0 | 3.88% | 940.0 | 1.96% | motif file (matrix) |
svg |
35 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.123e+00 | 0.0031 | 73.0 | 8.85% | 2784.7 | 5.81% | motif file (matrix) |
svg |
36 |
| PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer | 1e-3 | -8.081e+00 | 0.0031 | 15.0 | 1.82% | 301.3 | 0.63% | motif file (matrix) |
svg |
37 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-3 | -7.966e+00 | 0.0034 | 34.0 | 4.12% | 1034.1 | 2.16% | motif file (matrix) |
svg |
38 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.899e+00 | 0.0036 | 52.0 | 6.30% | 1827.5 | 3.81% | motif file (matrix) |
svg |
39 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.863e+00 | 0.0036 | 65.0 | 7.88% | 2431.5 | 5.07% | motif file (matrix) |
svg |
40 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -7.816e+00 | 0.0037 | 33.0 | 4.00% | 1001.3 | 2.09% | motif file (matrix) |
svg |
41 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -7.719e+00 | 0.0039 | 44.0 | 5.33% | 1482.3 | 3.09% | motif file (matrix) |
svg |
42 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -7.665e+00 | 0.0041 | 99.0 | 12.00% | 4102.4 | 8.56% | motif file (matrix) |
svg |
43 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.564e+00 | 0.0044 | 45.0 | 5.45% | 1538.5 | 3.21% | motif file (matrix) |
svg |
44 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.517e+00 | 0.0045 | 59.0 | 7.15% | 2182.7 | 4.55% | motif file (matrix) |
svg |
45 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.494e+00 | 0.0045 | 7.0 | 0.85% | 80.3 | 0.17% | motif file (matrix) |
svg |
46 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -7.424e+00 | 0.0047 | 92.0 | 11.15% | 3784.7 | 7.90% | motif file (matrix) |
svg |
47 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -7.133e+00 | 0.0062 | 47.0 | 5.70% | 1662.8 | 3.47% | motif file (matrix) |
svg |
48 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.974e+00 | 0.0071 | 39.0 | 4.73% | 1315.2 | 2.74% | motif file (matrix) |
svg |
49 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.884e+00 | 0.0076 | 115.0 | 13.94% | 5015.3 | 10.46% | motif file (matrix) |
svg |
50 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.676e+00 | 0.0092 | 41.0 | 4.97% | 1427.3 | 2.98% | motif file (matrix) |
svg |
51 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -6.565e+00 | 0.0101 | 6.0 | 0.73% | 69.4 | 0.14% | motif file (matrix) |
svg |
52 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -6.519e+00 | 0.0103 | 92.0 | 11.15% | 3899.7 | 8.14% | motif file (matrix) |
svg |
53 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -6.349e+00 | 0.0120 | 28.0 | 3.39% | 879.1 | 1.83% | motif file (matrix) |
svg |
54 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.269e+00 | 0.0128 | 58.0 | 7.03% | 2256.9 | 4.71% | motif file (matrix) |
svg |
55 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.231e+00 | 0.0130 | 31.0 | 3.76% | 1016.6 | 2.12% | motif file (matrix) |
svg |
56 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.206e+00 | 0.0131 | 15.0 | 1.82% | 364.1 | 0.76% | motif file (matrix) |
svg |
57 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.117e+00 | 0.0141 | 154.0 | 18.67% | 7176.2 | 14.97% | motif file (matrix) |
svg |
58 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.069e+00 | 0.0145 | 29.0 | 3.52% | 940.3 | 1.96% | motif file (matrix) |
svg |
59 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.058e+00 | 0.0145 | 39.0 | 4.73% | 1386.9 | 2.89% | motif file (matrix) |
svg |
60 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.053e+00 | 0.0145 | 65.0 | 7.88% | 2618.9 | 5.46% | motif file (matrix) |
svg |
61 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.868e+00 | 0.0169 | 49.0 | 5.94% | 1868.9 | 3.90% | motif file (matrix) |
svg |
62 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.850e+00 | 0.0169 | 205.0 | 24.85% | 9974.6 | 20.81% | motif file (matrix) |
svg |
63 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -5.735e+00 | 0.0187 | 22.0 | 2.67% | 663.5 | 1.38% | motif file (matrix) |
svg |
64 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.677e+00 | 0.0195 | 16.0 | 1.94% | 424.6 | 0.89% | motif file (matrix) |
svg |
65 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -5.675e+00 | 0.0195 | 33.0 | 4.00% | 1145.1 | 2.39% | motif file (matrix) |
svg |
66 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.575e+00 | 0.0209 | 34.0 | 4.12% | 1198.0 | 2.50% | motif file (matrix) |
svg |
67 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.525e+00 | 0.0217 | 273.0 | 33.09% | 13802.6 | 28.80% | motif file (matrix) |
svg |
68 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.510e+00 | 0.0217 | 72.0 | 8.73% | 3030.8 | 6.32% | motif file (matrix) |
svg |
69 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.445e+00 | 0.0228 | 37.0 | 4.48% | 1346.7 | 2.81% | motif file (matrix) |
svg |
70 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.379e+00 | 0.0240 | 14.0 | 1.70% | 360.4 | 0.75% | motif file (matrix) |
svg |
71 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.313e+00 | 0.0253 | 22.0 | 2.67% | 689.0 | 1.44% | motif file (matrix) |
svg |
72 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.311e+00 | 0.0253 | 65.0 | 7.88% | 2707.8 | 5.65% | motif file (matrix) |
svg |
73 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.226e+00 | 0.0268 | 31.0 | 3.76% | 1090.3 | 2.27% | motif file (matrix) |
svg |
74 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.073e+00 | 0.0308 | 22.0 | 2.67% | 703.1 | 1.47% | motif file (matrix) |
svg |
75 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -5.045e+00 | 0.0313 | 73.0 | 8.85% | 3143.8 | 6.56% | motif file (matrix) |
svg |
76 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -5.010e+00 | 0.0320 | 24.0 | 2.91% | 794.5 | 1.66% | motif file (matrix) |
svg |
77 |
| PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.985e+00 | 0.0323 | 60.0 | 7.27% | 2500.9 | 5.22% | motif file (matrix) |
svg |
78 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -4.965e+00 | 0.0326 | 32.0 | 3.88% | 1157.4 | 2.41% | motif file (matrix) |
svg |
79 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.905e+00 | 0.0341 | 49.0 | 5.94% | 1969.7 | 4.11% | motif file (matrix) |
svg |
80 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.887e+00 | 0.0343 | 9.0 | 1.09% | 195.8 | 0.41% | motif file (matrix) |
svg |
81 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.873e+00 | 0.0344 | 6.0 | 0.73% | 98.5 | 0.21% | motif file (matrix) |
svg |
82 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.811e+00 | 0.0361 | 106.0 | 12.85% | 4881.3 | 10.18% | motif file (matrix) |
svg |
83 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.764e+00 | 0.0374 | 175.0 | 21.21% | 8583.7 | 17.91% | motif file (matrix) |
svg |
84 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -4.753e+00 | 0.0374 | 3.0 | 0.36% | 24.1 | 0.05% | motif file (matrix) |
svg |