Information for 4-GTTAATGTTTAAC (Motif 3)

A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
Reverse Opposite:
A C T G A G C T C A G T C G T A G T C A C G T A A T G C C G T A A C G T A G C T C T G A C G T A A G T C
p-value:1e-16
log p-value:-3.700e+01
Information Content per bp:1.814
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 14.4bp
Average Position of motif in Background72.5 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GTTAATGTTTAAC-
-TTAATGTTTAACC
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

HNF1B/MA0153.2/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTTAATGTTTAAC
GTTAATGATTAAC
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATGTTTAAC-
NGTTAATNATTAACN
 A C G T A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GTTAATGTTTAAC
GTTAATNATTAA-
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATGTTTAAC
NNGTANTGTTTTNC
 A C G T A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTTAATGTTTAAC
--TATTGTTTATT
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTTAATGTTTAAC
----ATGTTTAC-
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
A C G T A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTTAATGTTTAAC
----TTGTTTAC-
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTAATGTTTAAC
GKTAATGR-----
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTTAATGTTTAAC
--NVWTGTTTAC-
 A C T G C G A T G A C T C T G A C G T A A C G T T A C G A C G T A C G T A C G T G C T A C T G A G T A C
A C G T A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T