Information for 7-CCAGCTGGAG (Motif 13)

G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
Reverse Opposite:
G A T C G C A T G A T C G T A C C G T A A C T G G T A C A G C T A C T G A C T G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.851
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif211.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets58.9 +/- 25.5bp
Average Position of motif in Background47.4 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGAG
NAHCAGCTGD--
 A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGAG
NAACAGCTGG--
 A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGAG
NNVCAGCTGB--
 A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCAGCTGGAG
NCAGCTGCTG
 G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCAGCTGGAG
NNVVCAGCTGBN-
 A C G T A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGGAG
ANCAGCTG---
 A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGAG
NAACAGCTGT--
 A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGAG
NNACAGCTGC--
 A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCAGCTGGAG
VNAVCAGCTGGC-
 A C G T A C G T A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGGAG
GACAGCTGCAG
 A C G T G T A C A G T C C T G A A C T G G T A C C G A T A C T G C T A G C G T A C T A G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G