Information for 11-TTWGCGCTMAKGR (Motif 20)

A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C T G A C A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A
p-value:1e-5
log p-value:-1.357e+01
Information Content per bp:1.871
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.3 +/- 7.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTWGCGCTMAKGR
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTWGCGCTMAKGR
TTTGGCGCCAAA--
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTWGCGCTMAKGR
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTWGCGCTMAKGR
TTTTCGCGCGAA---
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTWGCGCTMAKGR
DTTTCCCGCC-----
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTWGCGCTMAKGR--
--TGCCCTNAGGGCA
 A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTWGCGCTMAKGR-
------CTAATKGV
 A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTWGCGCTMAKGR
-ATGCCCTGAGGC
 A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTWGCGCTMAKGR--
--TGCCCTNAGGGCA
 A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTWGCGCTMAKGR
----NGCTN----
 A C G T A C G T C G T A A C T G A G T C A C T G A G T C C G A T G T C A C G T A A C T G A C T G C T A G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T