Information for 1-CTTCTGATTGGCT (Motif 2)

G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T
Reverse Opposite:
C T G A T C A G G T A C A T G C G T C A G T C A C G A T T A G C T C G A C T A G G T C A T C G A C A T G
p-value:1e-16
log p-value:-3.746e+01
Information Content per bp:1.644
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif441.7
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets51.9 +/- 27.2bp
Average Position of motif in Background46.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:CTTCTGATTGGCT
---CCGATTGGCT
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CTTCTGATTGGCT-----
---CTGATTGGTCNATTT
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:CTTCTGATTGGCT---
----TGATTGGCTANN
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CTTCTGATTGGCT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTTCTGATTGGCT
---TTGATTGN--
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.64
Offset:7
Orientation:forward strand
Alignment:CTTCTGATTGGCT
-------TTGGCA
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CTTCTGATTGGCT--
------NTTGGCANN
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGATTGGCT--
NNNNGTTGATTGGGTCG
 A C G T A C G T G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CTTCTGATTGGCT--
-------TWGTCTGV
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTCTGATTGGCT--
---BTGABTGACAGS
 G A T C A G C T A C G T G A T C A G C T A T C G C G T A A C G T A C G T A T C G A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C