Information for 4-TYGGTGKCCAGKGASA (Motif 11)

A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A
Reverse Opposite:
A G C T A T G C A G C T A G T C G T A C T G A C C G A T C T A G C A T G G T A C A G T C T G C A A G T C T G A C T C A G T C G A
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.645
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif192.1
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets56.3 +/- 25.7bp
Average Position of motif in Background51.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TYGGTGKCCAGKGASA
--NGTTGCCATGGCAA
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TYGGTGKCCAGKGASA-
---GTTGCCATGGNAAC
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TYGGTGKCCAGKGASA
--GGTTGCCATGGCAA
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TYGGTGKCCAGKGASA-
-CGGTTGCCATGGCAAC
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A A C G T
A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TYGGTGKCCAGKGASA-
--KGTTGCCATGGCAAC
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A A C G T
A C G T A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX4/MA0799.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TYGGTGKCCAGKGASA--
--CGTTGCCATGGCAACN
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TYGGTGKCCAGKGASA
RGTTAGTGCCCY------
 A C G T A C G T A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TYGGTGKCCAGKGASA---
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TYGGTGKCCAGKGASA--
--CGTTGCCATGGCAACN
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TYGGTGKCCAGKGASA
--GGGGCCCAAGGGGG
 A G C T A G T C A C T G C T A G A C G T C T A G A C T G G T A C G A T C C G T A A C T G C A T G A C T G T C G A T A C G C T G A
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G