p-value: | 1e-8 |
log p-value: | -1.983e+01 |
Information Content per bp: | 1.846 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.91% |
Number of Background Sequences with motif | 6.5 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 48.6 +/- 25.6bp |
Average Position of motif in Background | 56.3 +/- 35.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0124.1_Obox5_1/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTBAGGAGTAAAT--- TAGAGGGATTAAATTTC |
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Pax6/MA0069.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTBAGGAGTAAAT AANTCATGCGTGAA- |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTBAGGAGTAAAT--- NANAGGGATTAATTATN |
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OTX2/MA0712.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTBAGGAGTAAAT ---NGGATTAA-- |
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Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTBAGGAGTAAAT ---AGGTGTTAAT |
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PB0171.1_Sox18_2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTBAGGAGTAAAT------- ----GGACTGAATTCATGCC |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTBAGGAGTAAAT--- ---GGCCATAAATCAC |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTBAGGAGTAAAT --VRGGATTARN- |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTBAGGAGTAAAT---- TTAGGTCGTAAAATTTC |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTBAGGAGTAAAT ---GGGATTAA-- |
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