Information for 11-ATGTTTTACAGTC (Motif 15)

G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
Reverse Opposite:
C T A G T C G A A G T C A C G T A C T G A C G T C G T A C G T A C G T A C G T A A G T C C G T A A C G T
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 24.3bp
Average Position of motif in Background73.6 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGTTTTACAGTC
-DGWTTTATGRCN
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGTTTTACAGTC
-TGAGTGACAGSC
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATGTTTTACAGTC
NNGTANTGTTTTNC----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGTTTTACAGTC
NTGATTTATGGCC
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGTTTTACAGTC----
TCNNTTTACAGCGNNNT
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGTTTTACAGTC----
TCNNTTTACAGCGNNNT
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATGTTTTACAGTC
---TTTTCCA---
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGTTTTACAGTC
-TGATTTATGGCC
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGTTTTACAGTC----
TCNCTTTACAGCGNNNT
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATGTTTTACAGTC
-TGATTTATGGCC
 G T C A A C G T A C T G A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G C T A G T C
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C