Information for 3-ACTTTGGCCG (Motif 7)

C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G
Reverse Opposite:
T A G C T C A G A T C G A G T C A G T C T G C A C T G A C T G A A T C G G A C T
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.662
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif782.1
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets49.0 +/- 26.6bp
Average Position of motif in Background49.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----ACTTTGGCCG-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTGGCCG--
TGGACTTTGNNCTCN
 A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTGGCCG---
TGGACTTTGNNCTNTG
 A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ACTTTGGCCG
---TTGGCA-
 C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTTTGGCCG-
--NTTGGCANN
 C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTGGCCG--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACTTTGGCCG-
TGACCTTTGCCCCA
 A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------ACTTTGGCCG
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTGGCCG-
TGACCTTTGCCCTA
 A C G T A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACTTTGGCCG
TGACCTTGACCT
 A C G T A C G T C T G A T A G C G A C T G A C T A C G T T C A G T C A G T A G C A G T C A T C G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T