Information for 3-GBTGGGCTGAATA (Motif 5)

A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A
Reverse Opposite:
C G A T G C T A A C G T A C G T G T A C C G T A A C T G A G T C A G T C A G T C C G T A T A C G A G T C
p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 29.9bp
Average Position of motif in Background51.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GBTGGGCTGAATA---
AGAGGGGATTAATTTAT
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GBTGGGCTGAATA---
TGTAGGGATTAATTGTC
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GBTGGGCTGAATA---
TGAAGGGATTAATCATC
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GBTGGGCTGAATA-
NNTNTCATGAATGT
 A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GBTGGGCTGAATA
-ATGGGGTGAT--
 A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GBTGGGCTGAATA---
TAGAGGGATTAAATTTC
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GBTGGGCTGAATA------
---GGACTGAATTCATGCC
 A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GBTGGGCTGAATA
-GTGGGGTGAT--
 A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GBTGGGCTGAATA---
NANAGGGATTAATTATN
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GBTGGGCTGAATA
---GGGATTAA--
 A C T G A G T C A C G T A C T G C T A G A C T G G T A C A C G T A C T G C G T A C G T A C A G T G C T A
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T