Information for 6-TGTATGCCAA (Motif 12)

C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A
Reverse Opposite:
G A C T A C G T C A T G C T A G A T G C C G T A A G C T T C G A G A T C G C T A
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.653
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.62%
Number of Background Sequences with motif1295.8
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets51.5 +/- 27.2bp
Average Position of motif in Background50.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TGTATGCCAA--
--GGTGCCAAGT
 C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TGTATGCCAA--
---ATGCCAACC
 C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TGTATGCCAA-
--CGTGCCAAG
 C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TGTATGCCAA
----TGCCAA
 C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGTATGCCAA-----
TTGTATGCAAATTAGA
 A C G T C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGTATGCCAA-----
TTGTATGCAAATTAGA
 A C G T C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TGTATGCCAA-
CCATTGTATGCAAAT
 A C G T A C G T A C G T A C G T C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGTATGCCAA------
ACTATGCCAACCTACC
 C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGTATGCCAA-----
TTGTATGCAAATTAGA
 A C G T C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TGTATGCCAA-
--TATGCAAAT
 C G A T C T A G A G C T T C G A G C A T T A C G G A T C G T A C T G C A C T G A A C G T
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T