Information for 4-TAATTGGGAA (Motif 10)

C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
Reverse Opposite:
A G C T C G A T A G T C G T A C G A T C C G T A G T C A A C G T A G C T G T C A
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.706
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif256.1
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets49.9 +/- 28.3bp
Average Position of motif in Background48.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGGAA
NTAATTGG---
 A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGGAA
NTAATTGG---
 A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

LBX2/MA0699.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGGAA
NNTAATTGGN--
 A C G T A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGGAA
GNTAATTGGN--
 A C G T A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGGAA
NTAATTGN---
 A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGGAA
GCTAATTAGN--
 A C G T A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGGAA
NTAATTGN---
 A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G A C G T A C G T A C G T

Shox2/MA0720.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGGAA
NTAATTAG---
 A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A G C T C G A T G T C A C G T A C A G T C G A T C T G A T C A G A C G T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGGAA
NNTAATTAGA--
 A C G T A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T

RAX2/MA0717.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGGAA
NTAATTGG---
 A C G T C A G T T C G A G T C A C A G T C G A T C T A G A C T G C T A G C G T A C T G A
A G C T C G A T T C G A C T G A C A G T A G C T C T A G T C A G A C G T A C G T A C G T