Information for 3-CTTATCTTTATTGTCW (Motif 7)

A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
Reverse Opposite:
C G T A C T A G T C G A G A T C C G T A C G T A A C G T T C G A C G T A C G T A A C T G C T G A A C G T C G T A C G T A T C A G
p-value:1e-19
log p-value:-4.586e+01
Information Content per bp:1.728
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.9 +/- 29.5bp
Average Position of motif in Background50.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW-
-TNAATTTTATTACCTN
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T A C G T
A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW
----TTTTTATTGG--
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW
----NTTTTATTACN-
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW
-----TTTTATTGC--
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW--
--NAATTTTATTACCNNN
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T A C G T A C G T
A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW
-----TTTTATGGCTN
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW-
NTNAATTTTATTGNATT
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW
----TTTTTATTGC--
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTTATCTTTATTGTCW
NNANTCTTATCTNNNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTTATCTTTATTGTCW--
--NAATTTTATTACCTNN
 A G T C C G A T G C A T C G T A A G C T G T A C A C G T A C G T A G C T G T C A A C G T A C G T C T A G A G C T A G T C C G A T A C G T A C G T
A C G T A C G T C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A