Information for 10-CMCTCAGCTACTC (Motif 18)

A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A C T A G A C G T C T G A C T A G A G T C A C G T A T C G C G T A A C T G A C T G A C T G
p-value:1e-7
log p-value:-1.736e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.5 +/- 22.8bp
Average Position of motif in Background58.2 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CMCTCAGCTACTC
--CGCAGCTGCG-
 A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CMCTCAGCTACTC
AGCCACTCAAG-----
 A C G T A C G T A C G T A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CMCTCAGCTACTC---
CTCAGCAGCTGCTACTG
 A C G T A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CMCTCAGCTACTC
AASCACTCAA------
 A C G T A C G T A C G T A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CMCTCAGCTACTC
----CAGCTGTT-
 A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CMCTCAGCTACTC
MRSCACTYAA------
 A C G T A C G T A C G T A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CMCTCAGCTACTC
----CAGCC----
 A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CMCTCAGCTACTC
-NNGCAGCTGTC-
 A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CMCTCAGCTACTC-
--AGCAGCTGCTNN
 A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CMCTCAGCTACTC
---NCAGCTGCTG
 A G T C T G A C A G T C A C G T A T G C C G T A A C T G A G T C A G C T T C G A A G T C C G A T A G T C
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G