Information for 1-VTGCAGTTTCCWGGMA (Motif 1)

T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A
Reverse Opposite:
A C G T C A T G G T A C A G T C C G A T A C T G A C T G G T C A C G T A G T C A G T A C A G C T T C A G A T G C G T C A A T G C
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.719
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets37.5 +/- 23.8bp
Average Position of motif in Background53.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:VTGCAGTTTCCWGGMA-
-----NTTTCCNGGAAA
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:VTGCAGTTTCCWGGMA---
-----NCTTCCNGGAAGNN
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:VTGCAGTTTCCWGGMA-
--NNNCTTTCCAGGAAA
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T
A C G T A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:VTGCAGTTTCCWGGMA-
-------TTCCNGGAAG
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:VTGCAGTTTCCWGGMA-
---NNNTTTCCTGGAAA
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T
A C G T A C G T A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.70
Offset:6
Orientation:forward strand
Alignment:VTGCAGTTTCCWGGMA-
------TTTCCAGGAAA
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:VTGCAGTTTCCWGGMA---
-----ATTTCCNGGAAATN
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:VTGCAGTTTCCWGGMA-
------TTTCCCAGAAN
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.65
Offset:5
Orientation:forward strand
Alignment:VTGCAGTTTCCWGGMA
-----ATTTCCAAGAA
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:VTGCAGTTTCCWGGMA
---CTGTTGCTAGGS-
 T A C G A C G T T A C G A G T C C T G A A C T G A C G T A C G T A C G T A G T C G T A C G C T A A C T G A C T G G T A C G T C A
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T