Information for 5-GGCGGTGCTGAGGTYC (Motif 9)

A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
Reverse Opposite:
A C T G C T A G C T G A A T G C A G T C A C G T A T G C C G T A C T A G A T G C G T C A A G T C A G T C A T C G A G T C G T A C
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.755
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.1 +/- 25.4bp
Average Position of motif in Background49.7 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGTGCTGAGGTYC
NAGANTGGCGGGGNGNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGTGCTGAGGTYC
GGGGGCGGGGCC-------
 A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCGGTGCTGAGGTYC
AGGGGGCGGGGCTG------
 A C G T A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCGGTGCTGAGGTYC
RGKGGGCGGAGC--------
 A C G T A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGTGCTGAGGTYC
GGGNGGGGGCGGGGC--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGTGCTGAGGTYC
NNAGGGGCGGGGTNNA-----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGTGCTGAGGTYC
GGGGGCGGGGC--------
 A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGTGCTGAGGTYC
NNVDGGGYGGGGCYN------
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGCGGTGCTGAGGTYC
-GAGGTCAAAAGGTCA
 A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
A C G T T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGTGCTGAGGTYC
GGGGNGGGGC--------
 A C G T A C G T A C T G C T A G A T G C A C T G A C T G A C G T A T C G A G T C A C G T A T C G C G T A A C T G A T C G A G C T G A T C T A G C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T