Information for 3-GGTTCSTTGCTGBGTG (Motif 7)

A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C T C G A A G T C G T C A C T A G A G T C C G T A T C G A A T C G A C T G C T G A G T C A A T G C A G T C
p-value:1e-11
log p-value:-2.592e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.2 +/- 24.4bp
Average Position of motif in Background66.2 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG-
--TCNCCTGCTGNGNNN
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG-
--TNTCCTGCTGTGNNG
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTTCSTTGCTGBGTG
GGCCYCCTGCTGDGH-
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG
--CCCCCTGCTGTG--
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG-
--NCCGTTGCTANGNGN
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG-
--NNTCCTGCTGTGNNN
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG-
--NNCGTTGCTATGGNN
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG--
----CTTCGCGGGGGGTC
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTTCSTTGCTGBGTG-
NNNNNATTGATGNGTGN
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GGTTCSTTGCTGBGTG
-----CCTGCTGAGH-
 A C T G A T C G A C G T A G C T A G T C T A G C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T