Information for 2-GTGCCTGGGTTTG (Motif 6)

T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A G T C A A T G C A T G C A G T C C G T A A T C G A C T G G A T C C G T A A G T C
p-value:1e-11
log p-value:-2.747e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.7 +/- 25.4bp
Average Position of motif in Background60.1 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGCCTGGGTTTG
CTGTTCCTGG-----
 A C G T A C G T T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGCCTGGGTTTG
TTGCGTGCVA---
 T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTGCCTGGGTTTG-
ATGCCCGGGCATGT
 T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGCCTGGGTTTG
-TGCGTG------
 T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGCCTGGGTTTG
GGACGTGC-----
 T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGCCTGGGTTTG
RYHYACCTGB-----
 A C G T A C G T T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCTGGGTTTG-
ANTGCGTGGGCGTNN
 A C G T T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGCCTGGGTTTG--
-----TGGGTGTGGC
 T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGCCTGGGTTTG
GGGTACGTGC-----
 A C G T A C G T T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTGCCTGGGTTTG-----
---GCTGACCTTGAACTN
 T A C G A C G T C T A G A G T C A T G C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T