Information for 8-GACAGCAGGGGGTTGA (Motif 17)

A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C G T C A C G T A A G T C A G T C A G T C A G T C A G T C C G A T A T C G A G T C A C G T A C T G C G A T A G T C
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 28.9bp
Average Position of motif in Background58.0 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GACAGCAGGGGGTTGA
CACAGCGGGGGGTC--
 A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GACAGCAGGGGGTTGA
CACAGCAGGGGG----
 A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACAGCAGGGGGTTGA
NCGCAGCGGGGGGTC--
 A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACAGCAGGGGGTTGA
NCNCAGCGGGGGGTC--
 A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACAGCAGGGGGTTGA
DCHCAGCAGGRGGCC--
 A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GACAGCAGGGGGTTGA
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACAGCAGGGGGTTGA----
GCCASCAGGGGGCGCYVNNG
 A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACAGCAGGGGGTTGA
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACAGCAGGGGGTTGA
DCTCAGCAGG-------
 A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GACAGCAGGGGGTTGA
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A T G C C G T A C T A G A C T G C T A G A C T G A C T G A C G T A C G T A T C G C T G A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T