Information for 7-AGCGGCCAAT (Motif 16)

C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A G C A T A C G T A C T G A C T G T G A C A G T C C T A G A G T C A G C T
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.853
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif74.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.5 +/- 27.1bp
Average Position of motif in Background44.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AGCGGCCAAT---
---AGCCAATCGG
 C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGCGGCCAAT--
ACTAGCCAATCA
 C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCCAAT---
AAATGGACCAATCAG
 A C G T A C G T C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCGGCCAAT
---TGCCAA-
 C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCGGCCAAT
-CGTGCCAAG
 C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCGGCCAAT--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCGGCCAAT--
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGCCAAT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCGGCCAAT---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCGGCCAAT--
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C C T A G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C