Information for 1-HTGGVTTTGTGCDGGC (Motif 1)

G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C G C T A C T A G A T G C C G T A A G T C C G T A C T G A C G T A A T G C A G T C A G T C C G T A C A T G
p-value:1e-16
log p-value:-3.713e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 17.4bp
Average Position of motif in Background62.9 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:HTGGVTTTGTGCDGGC
NNGCGTGTGTGCNGCN
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:HTGGVTTTGTGCDGGC
NNNNTTGTGTGCTTNN
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:HTGGVTTTGTGCDGGC
---CCWTTGTYYB---
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:HTGGVTTTGTGCDGGC
----CTTTGT------
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:HTGGVTTTGTGCDGGC
---CCTTTGTTTT---
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:HTGGVTTTGTGCDGGC
GGGGGTGTGTCC----
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:HTGGVTTTGTGCDGGC
TTGGCATGGTGCCA--
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:HTGGVTTTGTGCDGGC
------CTGTTCCTGG
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:HTGGVTTTGTGCDGGC
---YCTTTGTTCC---
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:HTGGVTTTGTGCDGGC-
-------TGCGTGGGYG
 G A T C A C G T A C T G A C T G T A C G C G A T A G C T A C G T C T A G A C G T A T C G A G T C C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G