Motif 19

Information for 14-CACGTGACGC (Motif 19)

Reverse Opposite:

p-value:	1e-8
log p-value:	-1.875e+01
Information Content per bp:	1.662
Number of Target Sequences with motif	32.0
Percentage of Target Sequences with motif	3.43%
Number of Background Sequences with motif	425.3
Percentage of Background Sequences with motif	1.03%
Average Position of motif in Targets	48.1 +/- 26.4bp
Average Position of motif in Background	45.4 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)	0.2
Multiplicity (# of sites on avg that occur together)	1.16
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:	1
Score:	0.89
Offset:	-1
Orientation:	reverse strand
Alignment:	-CACGTGACGC NCACGTGACN-

TFE3/MA0831.1/Jaspar

Match Rank:	2
Score:	0.86
Offset:	-2
Orientation:	forward strand
Alignment:	--CACGTGACGC ATCACGTGAC--

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:	3
Score:	0.86
Offset:	-1
Orientation:	reverse strand
Alignment:	-CACGTGACGC TCACGTGACC-

TFEB/MA0692.1/Jaspar

Match Rank:	4
Score:	0.86
Offset:	-2
Orientation:	forward strand
Alignment:	--CACGTGACGC ATCACGTGAC--

E-box(bHLH)/Promoter/Homer

Match Rank:	5
Score:	0.85
Offset:	-1
Orientation:	reverse strand
Alignment:	-CACGTGACGC- TCACGTGACCGG

BHLHE41/MA0636.1/Jaspar

Match Rank:	6
Score:	0.85
Offset:	-2
Orientation:	forward strand
Alignment:	--CACGTGACGC GTCACGTGAC--

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:	7
Score:	0.85
Offset:	-2
Orientation:	reverse strand
Alignment:	--CACGTGACGC ACCACGTGAC--

Mitf/MA0620.1/Jaspar

Match Rank:	8
Score:	0.84
Offset:	-1
Orientation:	reverse strand
Alignment:	-CACGTGACGC NCACGTGACN-

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:	9
Score:	0.84
Offset:	0
Orientation:	reverse strand
Alignment:	CACGTGACGC CACGTGDC--

BHLHE40/MA0464.2/Jaspar

Match Rank:	10
Score:	0.84
Offset:	-2
Orientation:	forward strand
Alignment:	--CACGTGACGC ATCACGTGAC--