Information for 12-GCCGGATTTT (Motif 14)

A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
Reverse Opposite:
G T C A T C G A C T G A G C T A G A C T T A G C G A T C A T C G A C T G T G A C
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.687
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif372.1
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets44.8 +/- 26.3bp
Average Position of motif in Background49.0 +/- 40.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCGGATTTT
ACCCGGATGTA
 A C G T A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGATTTT
ANCAGGATGT-
 A C G T A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCCGGATTTT-
GTACATCCGGATTTTT
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCGGATTTT
ACCGGAAGTG
 A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

ETV4/MA0764.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCGGATTTT
ACCGGAAGTA
 A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCGGATTTT
RCCGGAARYN
 A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCGGATTTT-
TTGCCCGGATTAGG
 A C G T A C G T A C G T A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

ETV1/MA0761.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCGGATTTT
ACCGGAAGTA
 A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A

FEV/MA0156.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGGATTTT
ACCGGAAGTG
 A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCGGATTTT
--CGGATTAN
 A C T G G T A C T A G C C T A G A T C G C T G A C G A T A G C T A G C T C A G T
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A